Volume 37 Issue 2
Mar.  2016
Turn off MathJax
Article Contents
Xin ZHENG, Tian-Qi ZHOU, Tao WAN, Anabel PERDICES, Jin-Quan YANG, Xin-Sheng TANG, Zheng-Ping WANG, Li-Qun HUANG, Song HUANG, Shun-Ping HE. Huangshan population of Chinese Zacco platypus (Teleostei, Cyprinidae) harbors diverse matrilines and high genetic diversity. Zoological Research, 2016, 37(2): 103-109. doi: 10.13918/j.issn.2095-8137.2016.2.103
Citation: Xin ZHENG, Tian-Qi ZHOU, Tao WAN, Anabel PERDICES, Jin-Quan YANG, Xin-Sheng TANG, Zheng-Ping WANG, Li-Qun HUANG, Song HUANG, Shun-Ping HE. Huangshan population of Chinese Zacco platypus (Teleostei, Cyprinidae) harbors diverse matrilines and high genetic diversity. Zoological Research, 2016, 37(2): 103-109. doi: 10.13918/j.issn.2095-8137.2016.2.103

Huangshan population of Chinese Zacco platypus (Teleostei, Cyprinidae) harbors diverse matrilines and high genetic diversity

doi: 10.13918/j.issn.2095-8137.2016.2.103
Funds:  This research was funded by the National Natural Science Foundation of China (NSFC 30870290, 31071891 and 31471968)
More Information
  • Corresponding author: Song HUANG, Shun-Ping HE
  • Received Date: 2015-06-18
  • Rev Recd Date: 2016-02-25
  • Publish Date: 2016-03-18
  • Six main mitochondrial DNA (mtDNA) lineages have been described in minnow (Zacco platypus) samples obtained from northern, western and southern China. Perdices et al. (2004) predicted that further sampling of other tributaries might discover more lineages of this species. In this study, we collected 26 Zacco platypus individuals in the Huangshan area of eastern China and determined the cytochrome b (cytb) sequence variations. Combined with reported data in GenBank, we identified ten matrilines (Zacco A-J) in a total of 169 samples, with relatively high molecular divergence found among them. The Huangshan population had the greatest genetic variation among all sampled regions and hosted six of the ten matrilines. Our results highlight the significance of the Huangshan area for the conservation of Zacco platypus.
  • loading
  • [1]
    Berrebi P, Boissin E, Fang F, Cattaneo-Berrebi G. 2005. Intron polymorphism(EPIC-PCR) reveals phylogeographic structure of Zacco platypus in China:a possible target for aquaculture development. Heredity, 94(6):589-598.
    Brito RM, Briolay J, Galtier N, Bouvet Y, Coelho MM. 1997. Phylogenetic relationships within genus Leuciscus (Pisces, Cyprinidae) in Portuguese fresh waters, based on mitochondrial DNA cytochrome b sequences.Molecular Phylogenetics and Evolution, 8(3):435-442.
    Chen Y. 1998. Fauna Sinica. Beijing, China:Science Press.
    Conrad M. 1983. Adaptability:The Significance of Variability from Molecule to Ecosystem. New York:Plenum Press.
    Deng FY, Zhang CG, Zhao YH, Zhou QH, Zhang J. 2013. Diversity and community structure of the fishes in the headstream region of the Dongjiang River. Chinese Journal of Zoology, 48(2):161-173.
    Doadrio I, Carmona JA, Machordom A. 2002. Haplotype diversity and phylogenetic relationships among the Iberian Barbels (Barbus, Cyprinidae) reveal two evolutionary lineages. The Journal of Heredity, 93(2):140-147.
    Drummond AJ, Rambaut AJ. 2007. BEAST:Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology, 7:214.
    Gao LM, Möller M, Zhang XM, Hollingsworth ML, Liu J, Mill RR, Gibby M, Li DZ. 2007. High variation and strong phylogeographic pattern among cpDNA haplotypes in Taxus wallichiana (Taxaceae) in China and North Vietnam. Molecular Ecology, 16(22):4684-4698.
    Grant WAS, Bowen BW. 1998. Shallow population histories in deep evolutionary lineages of marine fishes:insights from sardines and anchovies and lessons for conservation. Journal of Heredity, 89(5):415-426.
    Han ZQ, Li YZ, Chen GB, Gao TX. 2008. Population genetic structure of coral reef species Plectorhinchus flavomaculatus in South China Sea.African Journal of Biotechnology, 7(11):1774-1781.
    He SP, Liu HZ, Chen YY, Kuwahara M, Nakajima T, Zhong Y. 2004. Molecular phylogenetic relationships of Eastern Asian Cyprinidae (Pisces:Cypriniformes) inferred from cytochrome b sequences. Science in China Series C-Life Sciences, 47(2):130-138.
    Huang S, He SP, Peng ZG, Zhao K, Zhao EM. 2007. Molecular phylogeography of endangered sharp-snouted pitviper (Deinagkistrodon acutus; Reptilia, Viperidae) in Mainland China. Molecular Phylogenetics and Evolution, 44(3):942-952.
    Huelsenbeck JP, Ronquist F. 2001. MRBAYES:Bayesian inference of phylogenetic trees. Bioinformatics, 17(8):754-755.
    Ju LX, Wang HJ, Jiang DB. 2007. Simulation of the Last Glacial Maximum climate over East Asia with a regional climate model nested in a general circulation model. Palaeogeography, Palaeoclimatology, Palaeoecology, 248(3-4):376-390.
    Ju YM, Hsu CH, Fang LS, Lin HD, Wu JH, Han CC, Chen IS, Chiang TY. 2013 Population structure and demographic history of Sicyopterus japonicus(Perciformes; Gobiidae) in Taiwan inferred from mitochondrial control region sequences. Genetics and Molecular Research, 12(3):4046-4059.
    Kawamura K, Ueda T, Arai R, Smith C. 2014. Phylogenetic relationships of bitterling fishes (Teleostei:Cypriniformes:Acheilognathinae), inferred from mitochondrial cytochrome b sequences. Zoological Science, 31(5):321-329.
    Kitamura J, Nagata N, Nakajima J, Sota T. 2012. Divergence of ovipositor length and egg shape in a brood parasitic bitterling fish through the use of different mussel hosts. Journal of Evolutionary Biology, 25(3):566-573.
    Li SH, Yeung CKL, Feinstein J, Han LX, Le MH, Wang CX, Ding P. 2009.Sailing through the Late Pleistocene:unusual historical demography of an East Asian endemic, the Chinese Hwamei (Leucodioptron canorum canorum), during the last glacial period. Molecular Ecology, 18(4):622-633.
    Mayden RL, Tang KL, Conway KW, Freyhof J, Chamberlain S, Haskins M, Schneider L, Sudkamp M, Wood RM, Agnew M, Bufalino A, Sulaiman Z, Miya M, Saitoh K, He SP. 2007. Phylogenetic relationships of Danio within the order Cypriniformes:a framework for comparative and evolutionary studies of a model species. Journal of Experimental Zoology Part B:Molecular and Developmental Evolution, 308B(5):642-654.
    Murphy RW, Fu JZ, Upton DE, De Lema T, Zhao EM. 2000. Genetic variability among endangered Chinese giant salamanders, Andrias davidianus.Molecular Ecology, 9(10):1539-1547.
    Perdices A, Cunha C, Coelho MM. 2004. Phylogenetic structure of Zacco platypus (Teleostei, Cyprinidae) populations on the upper and middle Chang Jiang (=Yangtze) drainage inferred from cytochrome b sequences.Molecular Phylogenetics and Evolution, 31(1):192-203.
    Perdices A, Sayanda D, Coelho MM. 2005. Mitochondrial diversity of Opsariichthys bidens (Teleostei, Cyprinidae) in three Chinese drainages.Molecular Phylogenetics and Evolution, 37(3):920-927.
    Perdices A, Coelho MM. 2006. Comparative phylogeography of Zacco platypus and Opsariichthys bidens (Teleostei, Cyprinidae) in China based on cytochrome b sequences. Journal of Zoological Systematics and Evolutionary Research, 44(4):330-338.
    Posada D. 2008. jModelTest:phylogenetic model averaging. Molecular Biology and Evolution, 25(7):1253-1256.
    Qian H, Ricklefs RE. 2000. Large-scale processes and the Asian bias in species diversity of temperate plants. Nature, 407(6801):180-182.
    Rüber L, Britz R, Kullandr SO, Zardoya R. 2004. Evolutionary and biogeographic patterns of the Badidae (Teleostei:Perciformes) inferred from mitochondrial and nuclear DNA sequence data. Molecular Phylogenetics and Evolution, 32(3):1010-1022.
    Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular Cloning:A Laboratory Manual. 2nd ed. New York:Cold Spring Harbor Laboratory Press.
    Sasaki T, Kartavtsev YP, Chiba SN, Uematsu T, Sviridov VV, Hanzawa N. 2007. Genetic divergence and phylogenetic independence of Far Eastern species in subfamily Leuciscinae (Pisces:Cyprinidae) inferred from mitochondrial DNA analyses. Genes & Genetic Systems, 82(4):329-340.
    Savolainen P, Zhang YP, Luo J, Lundeberg J, Leitner T. 2002. Genetic evidence for an East Asian origin of domestic dogs. Science, 298(5598):1610-1613.
    Schmidt TR, Gold JR. 1993. Complete sequence of the mitochondrial cytochrome b gene in the Cherryfin shiner, Lythrurus roseipinnis (Teleostei:Cyprinidae). Copeia, 1993(3):880-883.
    Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997.
    The CLUSTAL_X windows interface:flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 25(24):4876-4882.
    Wang CF, Hsieh CH, Lee SC, Wang HY. 2011. Systematics and phylogeography of the Taiwanese endemic minnow Candidia barbatus(Pisces:Cyprinidae) based on DNA sequence, allozymic, and morphological analyses. Zoological Journal of the Linnean Society, 161(3):613-632.
    Wang HY, Wang CF, Du SY, Lee SC. 2007. New insights on molecular systematics of opsariichthines based on cytochrome b sequencing. Journal of Fish Biology, 71:18-32.
    Wu YK, Wang YZ, Jiang K, Hanken J. 2013. Significance of pre-Quaternary climate change for montane species diversity:Insights from Asian salamanders(Salamandridae:Pachytriton). Molecular Phylogenetics and Evolution, 66(1):380-390.
    Yang JQ, Tang WQ, Liao TY, Sun Y, Zhou ZC, Han CC, Liu D, Lin HD. 2012. Phylogeographical Analysis on Squalidus argentatus Recapitulates Historical Landscapes and Drainage Evolution on the Island of Taiwan and Mainland China. International Journal of Molecular Sciences, 13(12):1405-1425.
    Zhang H, Yan J, Zhang GQ, Zhou KY. 2008. Phylogeography and demographic history of Chinese black-spotted frog populations (Pelophylax nigromaculata):evidence for independent refugia expansion and secondary contact. BMC Evolutionary Biology, 8:21.
    Zhang HN, Chen CG, Huang KR, Li ZQ, Zhang FL, Chen G. 1990. The New Geological Structures, Tectonic Movements and Geological Environment in Coastal Line of South China. Beijing:Earthquake Press. (in Chinese)
  • 加载中


    通讯作者: 陈斌, bchen63@163.com
    • 1. 

      沈阳化工大学材料科学与工程学院 沈阳 110142

    1. 本站搜索
    2. 百度学术搜索
    3. 万方数据库搜索
    4. CNKI搜索

    Article Metrics

    Article views (1155) PDF downloads(1958) Cited by()
    Proportional views


    DownLoad:  Full-Size Img  PowerPoint